I just folded my first protein


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Thread: I just folded my first protein

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  1. #11
    Join Date
    Oct 2002
    Location
    Earth
    Posts
    1,616
    I'll have to check out that youtube when I get to work. Those things take forever on the dial-up system!

    If we ever get the DSL we are being promised maybe things will get better. (Last I heard though, our max upload will only be 1 Mbps and it will cost probably over $50/month.)
    Until then I still see a lot of this:
    Code:
    [13:09:25] + Attempting to send results [April 5 13:09:25 UTC]
    [13:13:30] Completed 70000 out of 500000 steps  (14%)
    [13:18:05] Completed 75000 out of 500000 steps  (15%)
    [13:22:47] Completed 80000 out of 500000 steps  (16%)
    [13:24:28] - Couldn't send HTTP request to server
    [13:24:28] + Could not connect to Work Server (results)
    [13:24:28]     (130.237.165.141:8080)
    [13:24:28] + Retrying using alternative port
    [13:27:31] Completed 85000 out of 500000 steps  (17%)
    [13:31:03] - Couldn't send HTTP request to server
    [13:31:03]   (Got status 408)
    [13:31:03] + Could not connect to Work Server (results)
    [13:31:03]     (130.237.165.141:80)
    [13:31:03]   Could not transmit unit 02 to Collection server; keeping in queue.
    Although... I sometimes wonder if the problem is Stanford, or my setup? This particular machine is a Windows Vista machine:

    Code:
    8 cores detected
    If you see this twice, MPI is working
    If you see this twice, MPI is working
    [12:06:09] MPIexec present
    
    
    --- Opening Log file [April 5 12:06:09 UTC]
    
    
    # Windows SMP Console Edition #################################################
    ###############################################################################
    
                           Folding@Home Client Version 6.34
    
                              http://folding.stanford.edu
    
    ###############################################################################
    ###############################################################################
    
    Launch directory: C:\Users\bs\Desktop\fah634
    Executable: C:\Users\bs\Desktop\fah634\FAH6.34-win32-SMP.exe
    Arguments: -advmethods -smp
    
    [12:06:09] - Ask before connecting: No
    [12:06:09] - User name: bs_texas (Team 36480)
    [12:06:09] - User ID: 129C3D2F11F6AD59
    [12:06:09] - Machine ID: 1
    [12:06:09]
    [12:06:09] Loaded queue successfully.
    [12:06:09]
    [12:06:09] Project: 7154 (Run 0, Clone 50, Gen 23)
    [12:06:09] + Processing work unit
    
    
    [12:06:09] Core required: FahCore_a3.exe
    [12:06:09] + Attempting to send results [April 5 12:06:09 UTC]
    [12:06:09] Core found.
    [12:06:09] Working on queue slot 07 [April 5 12:06:09 UTC]
    [12:06:09] + Working ...
    [12:06:09]
    [12:06:09] *------------------------------*
    [12:06:09] Folding@Home Gromacs SMP Core
    [12:06:09] Version 2.27 (Dec. 15, 2010)
    [12:06:09]
    [12:06:09] Preparing to commence simulation
    [12:06:09] - Looking at optimizations...
    [12:06:09] - Created dyn
    [12:06:09] - Files status OK
    [12:06:09] - Expanded 1769031 -> 1957708 (decompressed 110.6 percent)
    [12:06:09] Called DecompressByteArray: compressed_data_size=1769031 data_size=19
    57708, decompressed_data_size=1957708 diff=0
    [12:06:09] - Digital signature verified
    [12:06:09]
    [12:06:09] Project: 6961 (Run 0, Clone 7, Gen 15)
    [12:06:09]
    [12:06:09] Assembly optimizations on if available.
    [12:06:09] Entering M.D.
    [12:06:15] Mapping NT from 8 to 8
    [12:06:15] Completed 0 out of 500000 steps  (0%)
    [12:11:01] Completed 5000 out of 500000 steps  (1%)
    [12:15:53] Completed 10000 out of 500000 steps  (2%)
    [12:20:41] Completed 15000 out of 500000 steps  (3%)
    [12:21:17] - Couldn't send HTTP request to server
    [12:21:17] + Could not connect to Work Server (results)
    [12:21:17]     (128.143.199.96:8080)
    [12:21:17] + Retrying using alternative port
    [12:22:37] - Couldn't send HTTP request to server
    [12:22:37]   (Got status 503)
    [12:22:37] + Could not connect to Work Server (results)
    [12:22:37]     (128.143.199.96:80)
    [12:22:37] - Error: Could not transmit unit 01 (completed April 2) to work serve
    r.
    
    
    [12:22:37] + Attempting to send results [April 5 12:22:37 UTC]
    [12:25:28] Completed 20000 out of 500000 steps  (4%)
    Fortunately I get a few of these to:

    Code:
    [10:45:22] + Attempting to send results [April 4 10:45:22 UTC]
    [11:18:22] + Results successfully sent
    [11:18:22] Thank you for your contribution to Folding@Home.
    [11:18:22] + Number of Units Completed: 151
    That upload only took about 30 minutes. But it was only about 3MB. In the recent past the work units uploading have all been around 42MB and can take 6 to 10 hours to upload. One of these days I'll take the time to figure out what's going on and see if I can get to a more reliable, steady state.
    Last edited by bs_texas; 04-04-2011 at 04:07 PM.
    -------------
    Folding is Fun

    I thought I made a mistake once, but, of course, I was mistaken.

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